2018-08-01 10:47:042025-05-12 10:18:37
description
similar to RNA methyltransferase
similar to ribosomal RNA methyltransferase
locus
BSU08020
BSU_08020
geneLength
1398
1401
product
unknown
putative rRNA methyltransferase
outlinks
bsu
BSU08020
BSU_08020
Gene
Coordinates
873,402 → 874,802
873,402 874,802
The protein
Protein family
TRAM domain (according to Swiss-Prot)
[SW|Methyltransferase superfamily] (according to UniProt)
[SW|class I-like SAM-binding methyltransferase superfamily] (according to UniProt)
Biological materials
Mutant
MGNA-C276 (yfjO::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2274 NBRP B. subtilis, Japan]
BKE08020 (Δ[[gene|yfjO]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE08020 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACGTTGTTCTCTCCGTTTC, downstream forward: _UP4_TAAAAAGAACATTTCCCAGT
BKK08020 (Δ[[gene|yfjO]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK08020 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACGTTGTTCTCTCCGTTTC, downstream forward: _UP4_TAAAAAGAACATTTCCCAGT
MGNA-C276 (yfjO::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2274 NBRP B. subtilis, Japan]
BKE08020 ([[gene|yfjO]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE08020 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACGTTGTTCTCTCCGTTTC, downstream forward: _UP4_TAAAAAGAACATTTCCCAGT
BKK08020 ([[gene|yfjO]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK08020 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACGTTGTTCTCTCCGTTTC, downstream forward: _UP4_TAAAAAGAACATTTCCCAGT
References
The protein
[SW|Domains]
[SW|TRAM domain] (aa 11-69) (according to UniProt)
The protein
Structure
[PDB|5XJ1] (from Streptococcus pneumoniae, 35% identity) [pubmed|28949991]